Easy Sourdough Pumpkin Muffins with Crumble Topping (Made with Discard!)
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Are you looking for a delicious way to use up your sourdough discard? These sourdough pumpkin muffins are about to become your new favorite fall recipe!

Theyโre incredibly moist, packed with warm pumpkin spice flavor, and topped with a sweet, buttery crumble that makes them taste like they came from a fancy bakery. The best part? You can whip up a batch in just 35 minutes, and theyโre perfect for breakfast, snack time, or even dessert.
If youโve been feeding your sourdough starter and wondering what to do with all that extra discard, this pumpkin muffin recipe is your answer. The sourdough adds a subtle tangy flavor that perfectly balances the sweetness of the pumpkin and brown sugar. Plus, baking with sourdough discard means youโre reducing waste while creating something absolutely delicious!
What Makes These Sourdough Pumpkin Muffins Special
These arenโt your ordinary pumpkin muffins. The addition of sourdough discard gives them a unique depth of flavor that regular pumpkin muffins just canโt match. The tangy notes from the sourdough starter complement the warm spices beautifully, while the crumble topping adds a delightful crunch that contrasts with the soft, tender crumb inside.
The secret to getting those tall, bakery-style muffin tops is starting them at a high temperature (425ยฐF) for the first 5 minutes, then lowering the heat to finish baking. This technique creates a beautiful dome and a slightly crispy top while keeping the inside perfectly moist.
Ingredient Notes and Tips for Perfect Pumpkin Muffins

For the Muffins:
- All-purpose flour โ This creates the perfect texture. Make sure to measure correctly by spooning flour into your measuring cup and leveling it off.
- Pumpkin puree โ Use plain pumpkin puree, NOT pumpkin pie filling. The pie filling has added sugars and spices that will throw off the recipe.
- Sourdough discard โ This is unfed starter from your jar. If you want even more rise, you can use an active sourdough starter instead.
- Pumpkin pie spice โ You can buy this pre-made or make your own by mixing cinnamon, ginger, nutmeg, and cloves like we do.
- Oil โ Vegetable, canola, or melted coconut oil all work great. Oil keeps these muffins extra moist.
- Both white and brown sugar โ The brown sugar adds moisture and a deeper flavor.
- Eggs โ Use room temperature eggs for better mixing.
- Milk โ Any milk works, including dairy-free options like almond or oat milk.

For the Crumble Topping:
- Melted butter โ This binds the crumble together. You can use salted, unsalted butter, or dairy-free butter if needed.
- Flour and sugars โ These create that perfect crumbly texture everyone loves.
How to Make Sourdough Pumpkin Muffins
Making these sourdough discard pumpkin muffins is super easy, even if youโre new to baking! Hereโs how to do it:
Prep Your Pan Preheat your oven to 425ยฐF and line your muffin pan with paper liners. This recipe makes 24 muffins, so youโll need two standard 12-cup muffin pans.

Mix the Dry Ingredients in a large mixing bowl, whisk together your flour, pumpkin spice, baking powder, baking soda, and salt. Set this aside while you work on the wet ingredients.
Add eggs
Add Discard
Add pumpkin
Combine the Wet Ingredients. In another bowl, mix the oil with both sugars until well combined. Add your eggs one at a time, mixing well after each one. Then stir in the sourdough discard, pumpkin puree, and vanilla until you have a smooth mixture.
Fold in dry ingredients
Mix until smooth
Bring It All Together: Add your flour mixture to the wet ingredients, alternating with the milk. Mix just until everything is combined โ donโt overmix or your muffins will be tough!

Make the Crumble. In a small bowl, mix together the flour, sugars, and pumpkin spice for the topping. Pour in the melted butter and stir until it looks like coarse crumbs.
Fill and Top Use a large cookie scoop (about 3 tablespoons) to fill your muffin cups. Top each one with 1-2 tablespoons of the crumble mixture.
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Bake to Perfection Bake at 425ยฐF for 5 minutes, then reduce the temperature to 350ยฐF and bake for another 20-22 minutes or until a toothpick inserted in the center comes out clean.
Cool. Let the muffins cool in the pan for 2-3 minutes, then transfer them to a cooling rack. This prevents soggy bottoms!

Delicious Variations to Try
Once youโve mastered the basic recipe, try these fun twists on your pumpkin sourdough muffins:
Chocolate Chip Version โ Fold in ยฝ to ยพ cup of chocolate chips to the batter for a sweeter treat. The chocolate pairs wonderfully with pumpkin!
Nutty Pumpkin Muffins โ Add ยฝ cup of chopped pecans or walnuts to the batter for extra crunch and nutty flavor.
Cream Cheese Swirl โ Mix 4 oz softened cream cheese with 2 tablespoons sugar and swirl it into the batter before baking.
Maple Glaze โ Drizzle cooled muffins with a simple glaze made from powdered sugar and maple syrup.
Streusel Instead of Crumble โ Make the topping chunkier by using cold butter instead of melted for bigger crumble pieces.

How to Store Your Pumpkin Muffins
These sourdough pumpkin muffins stay fresh and delicious when stored properly:
Room Temperature: Keep muffins in an airtight container for up to 3 days. Theyโll stay nice and moist!
Refrigerator: Store in an airtight container in the fridge for up to 5 days. This is great if your kitchen is warm.
Freezer: These muffins freeze beautifully! Wrap each muffin individually in plastic wrap, then place them all in a freezer bag. Theyโll keep for up to 3 months. To enjoy, thaw at room temperature for an hour or microwave for 20-30 seconds.

Related Recipes Youโll Love
If you enjoyed these pumpkin sourdough muffins, try these other sourdough discard recipes:
- Sourdough Chocolate Chip Cookies โ Chewy and delicious
- Cinnamon Sugar Baked Donuts โ Another great way to use discard!
- Sourdough Cinnamon Rolls โ An overnight recipe for an amazing breakfast treat
- Sourdough Pancakes โ Perfect for weekend breakfasts
- Easy Sourdough Blueberry Muffins โ A fruity alternative
- Sourdough Cheese Sconesโ A cheesy option
- Discard Coffee Cake โ For coffee lovers
- Sourdough Pumpkin Bread โ Great for slicing.

Ready to Bake?
These sourdough pumpkin muffins are calling your name! Theyโre the perfect way to use your sourdough discard while creating something your whole family will love. The combination of warm spices, tender crumb, and crunchy crumble topping makes these muffins absolutely irresistible.
Did you make this recipe? Iโd love to hear how it turned out! Please leave a comment below and rate this recipe with 5 stars if you loved it. Your feedback helps other bakers and makes my day! Donโt forget to share a photo of your beautiful muffins on social media and tag @hostessatheart so I can see your creations!
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